dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02925
Location and strand information: 622 - 3753 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02926
Location and strand information: 3778 - 5859 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02927
Location and strand information: 5961 - 6647 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02928
Location and strand information: 6736 - 8121 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5706
Protein molecular weight: 52324.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02929
Location and strand information: 8166 - 8531 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02930
Location and strand information: 8570 - 10720 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7416
Protein molecular weight: 82341.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02931
Location and strand information: 10752 - 13109 (-)
Family: GH43_34|GH43|CBM32|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1388
Protein molecular weight: 89495.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02932
Location and strand information: 13325 - 16228 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.3606
Protein molecular weight: 110343.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02933
Location and strand information: 16358 - 17596 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.699
Protein molecular weight: 46038.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02934
Location and strand information: 17645 - 19180 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4933
Protein molecular weight: 56390.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02935
Location and strand information: 19131 - 19733 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02936
Location and strand information: 19730 - 21133 (+)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 6.2698
Protein molecular weight: 51919.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02937
Location and strand information: 21130 - 23895 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1747
Protein molecular weight: 104461.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02938
Location and strand information: 24242 - 25414 (-)
Family: Aminotran_1_2
Protein type: STP
Protein description: Cystathionine beta-lyase PatB

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02939
Location and strand information: 25600 - 26871 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02940
Location and strand information: 26996 - 28669 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001378_6|CGC1
Gene ID: MGYG000001378_02941
Location and strand information: 28699 - 31884 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001378_02928	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000001378_02930	GH42_e7
MGYG000001378_02931	GH43_e26\|CBM32_e74\|3.2.1.55	xylan
MGYG000001378_02932	GH2_e63\|3.2.1.23	beta-galactan
MGYG000001378_02933	CE12_e46
MGYG000001378_02934	GH28_e26\|3.2.1.-	pectin
MGYG000001378_02936	GH28_e52\|3.2.1.-	pectin
MGYG000001378_02937	GH106_e0\|3.2.1.174	pectin

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_02925	TonB-dependent receptor SusC	TC	622	3753	+	1.B.14.6.1
MGYG000001378_02926	hypothetical protein	null	3778	5859	+	SusD-like_3\| SusD_RagB
MGYG000001378_02927	hypothetical protein	null	5961	6647	-	Lipase_GDSL_lke
MGYG000001378_02928	hypothetical protein	CAZyme	6736	8121	-	GH28
MGYG000001378_02929	hypothetical protein	null	8166	8531	-	No domain
MGYG000001378_02930	Beta-galactosidase	CAZyme	8570	10720	-	GH42
MGYG000001378_02931	hypothetical protein	CAZyme	10752	13109	-	GH43_34\| GH43\| CBM32\| GH43_18
MGYG000001378_02932	Beta-galactosidase	CAZyme	13325	16228	+	GH2
MGYG000001378_02933	hypothetical protein	CAZyme	16358	17596	+	CE12
MGYG000001378_02934	hypothetical protein	CAZyme	17645	19180	+	GH28
MGYG000001378_02935	hypothetical protein	null	19131	19733	+	DUF4450
MGYG000001378_02936	Exo-poly-alpha-D-galacturonosidase	CAZyme	19730	21133	+	GH28
MGYG000001378_02937	hypothetical protein	CAZyme	21130	23895	+	GH106
MGYG000001378_02938	Cystathionine beta-lyase PatB	STP	24242	25414	-	Aminotran_1_2
MGYG000001378_02939	hypothetical protein	null	25600	26871	-	No domain
MGYG000001378_02940	SusD-like protein	TC	26996	28669	-	8.A.46.1.3
MGYG000001378_02941	TonB-dependent receptor SusC	TC	28699	31884	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature